BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016G05LP1|AL427060
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig929 1391 0.0
>3x_Contig929
Length = 3696
Score = 1391 bits (698), Expect = 0.0
Identities = 728/740 (98%), Gaps = 1/740 (0%)
Strand = Plus / Plus
Query: 174 ggtttcggtggccatggcggtcccggcggtcctggcggccatggtggccgtggcgatgga 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 ggtttcggtggccatggcggtcccggcggtcctggcggccatggtggccgtggcgatgga 1278
Query: 234 cgcttctaaccacaggtaccaggaatatcaatctatgcaaatataattagttttatctta 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1279 cgcttctaaccacaggtaccaggaatatcaatctatgcaaatataattagttttatctta 1338
Query: 294 ttccatgccttacgtaaccgtaacctgatgactgggaggatcatgttctgaatgcagcac 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 ttccatgccttacgtaaccgtaacctgatgactgggaggatcatgttctgaatgcagcac 1398
Query: 354 gtgatgcttttttcttgttttccacacagaatgctcatgagtatctctgttttacgaaaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1399 gtgatgcttttttcttgttttccacacagaatgctcatgagtatctctgttttacgataa 1458
Query: 414 aaactaaactaaggtaatcagttataatcagttagttcttcacgaaggaagctgtgtgtt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 aaactaaactaaggtaatcagttataatcagttagttcttcacgaaggaagctgtgtgtt 1518
Query: 474 ttcgtgcgttaaaggacgagtacaaagtgcctatagcactttaaacagagtagctgtcag 533
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 ttcgtgcgtgaaaggacgagtacaaagtgcctatagcactttaaacagagtagctgtcag 1578
Query: 534 caactgtaatagcacataaaggttttggtgattttcttcttatttgtacgtttacctgtt 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 caactgtaatagcacataaaggttttggtgattttcttcttatttgtacgtttacctgtt 1638
Query: 594 ctaaactttgaagatttagcaggggtatatcgaacagatcaaggataggtgcactgcctg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 ctaaactttgaagatttagcaggggtatatcgaacagatcaaggataggtgcactgcctg 1698
Query: 654 tgcttcaattttactttacgaattctgctcaccaccgttgcwgtwgagatcaaacaagaa 713
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1699 tgcttcaattttactttacgaattctgctcaccaccgttgcagtagagatcaaacaagaa 1758
Query: 714 acgagactgcaataaacgacagatgacagagaatggagcagaaatacctgtwgttaacct 773
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1759 acgagactgcaataaaccacagatgacagagaatggagcagaaatacctgtagttaacct 1818
Query: 774 cacgctagatgctgaggaggagggagaaaacgaataagtttctgagttgaagagamagga 833
||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||
Sbjct: 1819 cacgctagatgctgaggaggaggaagaaaacgaagtagtttctgagttgaagagacagga 1878
Query: 834 gamgccgaagttatttgtgaagcgagagatcgatgaaatagaagcagaacatctgcagcc 893
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 gacgccgaagttatttgtgaagcgagagatcgatgaaatagaagcagaacatctgcagcc 1938
Query: 894 tctggtgaaa-actttaaac 912
|||||||||| |||||||||
Sbjct: 1939 tctggtgaaacactttaaac 1958
Score = 189 bits (95), Expect = 7e-48
Identities = 112/117 (95%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 1 gatcattgctatyacatgcgatgtcatctcaccatgataagaagcataacgaaagccatt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 gatcattgctatcacatgcgatgtcatctcaccatgataagaagcataacgaaagccatt 1104
Query: 61 tcagtgggtctagtgggtctagtggctttggtggctttggtggt-tttggtggctcc 116
||||||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||
Sbjct: 1105 tcagtgggtctcgtgggtctagtggctttggtggatttagtggtatttggtggctcc 1161
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5480
Number of Sequences: 1807
Number of extensions: 5480
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)